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3.2.6 GNU Parallel
------------------
There are ways to run commands in parallel that are not built into Bash.
GNU Parallel is a tool to do just that.
GNU Parallel, as its name suggests, can be used to build and run
commands in parallel. You may run the same command with different
arguments, whether they are filenames, usernames, hostnames, or lines
read from files. GNU Parallel provides shorthand references to many of
the most common operations (input lines, various portions of the input
line, different ways to specify the input source, and so on). Parallel
can replace `xargs' or feed commands from its input sources to several
different instances of Bash.
For a complete description, refer to the GNU Parallel documentation.
A few examples should provide a brief introduction to its use.
For example, it is easy to replace `xargs' to gzip all html files in
the current directory and its subdirectories:
find . -type f -name '*.html' -print | parallel gzip
If you need to protect special characters such as newlines in file
names, use find's `-print0' option and parallel's `-0' option.
You can use Parallel to move files from the current directory when
the number of files is too large to process with one `mv' invocation:
ls | parallel mv {} destdir
As you can see, the {} is replaced with each line read from standard
input. While using `ls' will work in most instances, it is not
sufficient to deal with all filenames. If you need to accommodate
special characters in filenames, you can use
find . -depth 1 \! -name '.*' -print0 | parallel -0 mv {} destdir
as alluded to above.
This will run as many `mv' commands as there are files in the current
directory. You can emulate a parallel `xargs' by adding the `-X'
option:
find . -depth 1 \! -name '.*' -print0 | parallel -0 -X mv {} destdir
GNU Parallel can replace certain common idioms that operate on lines
read from a file (in this case, filenames listed one per line):
while IFS= read -r x; do
do-something1 "$x" "config-$x"
do-something2 < "$x"
done < file | process-output
with a more compact syntax reminiscent of lambdas:
cat list | parallel "do-something1 {} config-{} ; do-something2 < {}" | process-output
Parallel provides a built-in mechanism to remove filename
extensions, which lends itself to batch file transformations or
renaming:
ls *.gz | parallel -j+0 "zcat {} | bzip2 >{.}.bz2 && rm {}"
This will recompress all files in the current directory with names
ending in .gz using bzip2, running one job per CPU (-j+0) in parallel.
(We use `ls' for brevity here; using `find' as above is more robust in
the face of filenames containing unexpected characters.) Parallel can
take arguments from the command line; the above can also be written as
parallel "zcat {} | bzip2 >{.}.bz2 && rm {}" ::: *.gz
If a command generates output, you may want to preserve the input
order in the output. For instance, the following command
{ echo foss.org.my ; echo debian.org; echo freenetproject.org; } | parallel traceroute
will display as output the traceroute invocation that finishes first.
Adding the `-k' option
{ echo foss.org.my ; echo debian.org; echo freenetproject.org; } | parallel -k traceroute
will ensure that the output of `traceroute foss.org.my' is displayed
first.
Finally, Parallel can be used to run a sequence of shell commands in
parallel, similar to `cat file | bash'. It is not uncommon to take a
list of filenames, create a series of shell commands to operate on
them, and feed that list of commnds to a shell. Parallel can speed
this up. Assuming that `file' contains a list of shell commands, one
per line,
parallel -j 10 < file
will evaluate the commands using the shell (since no explicit command is
supplied as an argument), in blocks of ten shell jobs at a time.
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